Re: Undefined symbols for architecture x86_64

["Tobias Schlüter" <tobias.schlueter@physik.uni-muenchen.de>]

Dear Felipe,

five seconds on google suggest that you may be interested in this 
package -> http://pds-rings.seti.org/toolkits/julian_133/ <-

HTH,
- Tobi

On 2013-10-20 02:49, Felipe Pimenta wrote:
> I am using gfortran to compile an ocean circulation model (FVCOM) on a
> Mac OS X 10.8.5.
>
> Everything goes well with the compilation until the error below results.
>
> Does anybody have any idea what is missing?
>
> Thanks,
>
> Felipe
>
>
>
> make: Circular mod_prec.o <- mod_prec.o dependency dropped.
> /usr/local/bin/gfortran    -O3    func_pointer.o mod_prec.o sinter.o
> mod_types.o mod_time.o mod_main.o mod_spherical.o mod_utils.o
> mod_clock.o eqs_of_state.o mod_bulk.o mod_interp.o mod_par.o
> mod_ncll.o mod_nctools.o mod_wd.o mod_sng.o mod_heatflux.o mod_input.o
> mod_force.o mod_obcs.o mod_petsc.o mod_semi_implicit.o mod_non_hydro.o
> mod_set_time.o ice_kinds_mod.o ice_model_size.o ice_domain.o
> ice_constants.o ice_fileunits.o ice_state.o ice_work.o ice_grid.o
> ice_albedo.o ice_calendar.o ice_flux.o ice_flux_in.o ice_itd.o
> ice_mechred.o ice_itd_linear.o ice_scaling.o ice_atmo.o ice_ocean.o
> ice_therm_vertical.o ice_init.o ice_therm_itd.o mod_ice2d.o mod_ice.o
> mod_startup.o mod_wqm.o mod_ncdio.o mod_setup.o mod_newinp.o
> particle.o linklist.o mod_lag.o mod_northpole.o mod_pwp.o mod_dye.o
> mod_optimal_interpolation.o mod_report.o mod_probe.o mod_gotm.o
> mod_balance_2d.o mod_tridiag.o mod_scal.o mod_meanflow.o mod_obcs2.o
> mod_obcs3.o mod_sed.o mod_enkf.o mod_etkf.o mod_rrk.o mod_rrkf_obs.o
> mod_rrkassim.o mod_enkf_ncd.o enkf_ncdio.o mod_enkf_obs.o
> mod_enkfassim.o mod_assim.o mod_nesting.o mod_visit.o mod_plbc.o
> mod_dam.o mod_station_timeseries.o mod_boundschk.o mod_main_wave.o
> swmod1.o swmod2.o swmod3.o mod_action_im.o mod_action_ex.o
> mod_wavesetup.o mod_wave_current_interaction.o mod_bbl.o fvcom.o
> genmap.o tge.o longshore_flow.o cell_area.o open_all.o load_grid.o
> allocate_all.o setup_domain.o genmap_obc.o genmap_lsf.o print_vals.o
> coords_n_const.o shape_coef_gcn.o shape_coef_gcy.o depth_grad.o
> grid_metrics.o cntrl_prmtrs.o init_sed.o internal_step.o bcond_gcn.o
> bcond_gcy.o adjust2d3d.o brough.o advection_edge_gcn.o
> advection_edge_gcy.o ghostuv.o advave_edge_gcn.o advave_edge_gcy.o
> phy_baropg.o baropg.o external_step.o extel_edge.o extuv_edge.o
> depth_check.o vertvl_edge.o adv_uv_edge_gcn.o adv_uv_edge_gcy.o
> vdif_uv.o extelpf_edge.o wreal.o viscofh.o adv_q.o fct_q2.o fct_q2l.o
> vdif_q.o adv_t.o adv_s.o fct_t.o vdif_ts.o vdif_ts_gom.o fct_s.o
> bcond_ts.o adjust_ts.o conv_over.o visitsim.o startup_type.o
> edge_len.o adcor.o icing.o rho_pmean.o calc_vort.o namelist.o
> nh_set_nesting.o mod_bio_3D.o mod_onedtide.o ocpmix.o ocpcre.o
> ocpids.o swanpre1.o swanpre2.o swanser.o swanmain.o swancom1.o
> swancom2.o swancom3.o swancom4.o swancom5.o       -L
> /Users/felipe/Work/UFSC/GCN/research/ocean/model/FVCOM/FVCOM3.1.6/FVCOM_source/libs/netcdf
> -lnetcdf -L /Users/felipe/Work/UFSC/GCN/research/ocean/model/FVCOM/FVCOM3.1.6/FVCOM_source/libs/julian
> -ljulian         -o fvcom
> Undefined symbols for architecture x86_64:
>    "_fjul_dutcoftai_", referenced from:
>        ___mod_time_MOD_write_datetime in mod_time.o
>    "_fjul_mjdoftai_", referenced from:
>        ___mod_time_MOD_read_datetime in mod_time.o
>    "_fjul_taiofdutc_", referenced from:
>        ___mod_time_MOD_read_datetime in mod_time.o
>    "_fjul_taiofmjd_", referenced from:
>        ___mod_time_MOD_write_datetime in mod_time.o
>    "_gjul_formatdate_", referenced from:
>        _fjul_formatdate_ in libjulian.a(fjulian.o)
>    "_gjul_formatpds_", referenced from:
>        _fjul_formatpds_ in libjulian.a(fjulian.o)
>    "_gjul_formatsql_", referenced from:
>        _fjul_formatsql_ in libjulian.a(fjulian.o)
>    "_gjul_formattime_", referenced from:
>        _fjul_formattime_ in libjulian.a(fjulian.o)
>    "_gjul_initleaps_", referenced from:
>        _fjul_initleaps_ in libjulian.a(fjulian.o)
>    "_gjul_parsedate_", referenced from:
>        _fjul_parsedate_ in libjulian.a(fjulian.o)
>    "_gjul_parsedt_", referenced from:
>        _fjul_parsedt_ in libjulian.a(fjulian.o)
>    "_gjul_parsetime_", referenced from:
>        _fjul_parsetime_ in libjulian.a(fjulian.o)
> ld: symbol(s) not found for architecture x86_64
> collect2: error: ld returned 1 exit status
> make: *** [fvcom] Error 1
> matadeiro:FVCOM_source felipe$ uname -a
> Darwin matadeiro.local 12.5.0 Darwin Kernel Version 12.5.0: Sun Sep 29
> 13:33:47 PDT 2013; root:xnu-2050.48.12~1/RELEASE_X86_64 x86_64
> matadeiro:FVCOM_source felipe$
>