[PATCH] release all idle heaps in the non-main-arena

[PATCH] release all idle heaps in the non-main-arena

[liudongyun]

liu.dongyun@h3c.com report this question in follow:
The system has a total of 32G memory and 12 core cpu. 
After frequent malloc and free memory by multiple threads, we found that many
physical memory that should have been released have not been released.We observe that 
the maximum free memory can reach 15G.

deng.hongjie@h3c.com recommend reducing the heap size of the non-main-arena, but it 
doesn't work. liu.dongyun@h3c.com found When the last heap in the user process into 
the non-main-area has memory in use, the previous heap will not be released, even if the 
previous heap is already free. This mechanism resulting in the memory cache reaching 15G.

liu.dongyun@h3c.com tried to solve this problem by checking to release the heap that the 
current chunk belongs to and unmmaped if it is all free. Then we adjust the heap size of
the non-main-arena to 512KB. The method has achieved good results. Submit patch only to 
modify one of them.

The test after modification has the following results. 

With business:
--------------------------------------------------------------------------------
Memory statistics are measured in KB:                                           
Slot 0:                                                                         
             Total      Used      Free    Shared   Buffers    Cached   FreeRatio
Mem:      32598612   7501484  25097128         0      1812   2121380       77.0%
--------------------------------------------------------------------------------

A few minutes after deleted business:
Memory statistics are measured in KB:                                           
Slot 0:                                                                         
             Total      Used      Free    Shared   Buffers    Cached   FreeRatio
Mem:      32598612   9763528  22835084         0        32   2118208       70.0%
--------------------------------------------------------------------------------

Bugzilla: https://sourceware.org/bugzilla/show_bug.cgi?id=27976
Reported-by: liudongyun <liu.dongyun@h3c.com> and
Reported-by: denghongjie <deng.hongjie@h3c.com>


---
 malloc/arena.c  | 30 +++++++++++++++++++++++++++++-
 malloc/malloc.c |  2 +-
 2 files changed, 30 insertions(+), 2 deletions(-)
 mode change 100644 => 100755 malloc/arena.c
 mode change 100644 => 100755 malloc/malloc.c

diff --git a/malloc/arena.c b/malloc/arena.c
old mode 100644
new mode 100755
index 7eb110445e..7812997886
--- a/malloc/arena.c
+++ b/malloc/arena.c
@@ -606,14 +606,42 @@ shrink_heap (heap_info *h, long diff)
     } while (0)
 
 static int
-heap_trim (heap_info *heap, size_t pad)
+heap_trim(heap_info *heap, heap_info *free_heap, size_t pad)
 {
   mstate ar_ptr = heap->ar_ptr;
   unsigned long pagesz = GLRO (dl_pagesize);
   mchunkptr top_chunk = top (ar_ptr), p;
   heap_info *prev_heap;
   long new_size, top_size, top_area, extra, prev_size, misalign;
+  heap_info *last_heap;
 
+  /*release part of the cache memory*/
+  last_heap = heap_for_ptr(top_chunk);  
+  if ((NULL != free_heap->prev) && (last_heap != free_heap))
+  {
+      p = chunk_at_offset(free_heap, sizeof(*heap));
+      if (!inuse(p))
+      {
+          if (chunksize(p) + sizeof(*free_heap) + MINSIZE == free_heap->size)
+          {
+              while(last_heap)
+              {
+                 if (last_heap->prev == free_heap)
+                 {
+                     last_heap->prev = free_heap->prev;
+                     break;
+                 }
+                 last_heap = last_heap->prev; 
+              }
+              ar_ptr->system_mem -= free_heap->size;
+              arena_mem -= free_heap->size;
+              unlink_chunk(ar_ptr, p);
+              delete_heap(free_heap);
+              return 1;
+          }
+      }
+  }
+  
   /* Can this heap go away completely? */
   while (top_chunk == chunk_at_offset (heap, sizeof (*heap)))
     {
diff --git a/malloc/malloc.c b/malloc/malloc.c
old mode 100644
new mode 100755
index 0e2e1747e0..40f0a8e458
--- a/malloc/malloc.c
+++ b/malloc/malloc.c
@@ -4665,7 +4665,7 @@ _int_free (mstate av, mchunkptr p, int have_lock)
 	heap_info *heap = heap_for_ptr(top(av));
 
 	assert(heap->ar_ptr == av);
-	heap_trim(heap, mp_.top_pad);
+	heap_trim(heap, heap_for_ptr(p), mp_.top_pad);
       }
     }
 
-- 
2.17.1

Re: [PATCH] release all idle heaps in the non-main-arena

[Siddhesh Poyarekar]

On 6/11/21 9:38 AM, liudongyun wrote:
> liu.dongyun@h3c.com report this question in follow:
> The system has a total of 32G memory and 12 core cpu.
> After frequent malloc and free memory by multiple threads, we found that many
> physical memory that should have been released have not been released.We observe that
> the maximum free memory can reach 15G.
> 
> deng.hongjie@h3c.com recommend reducing the heap size of the non-main-arena, but it
> doesn't work. liu.dongyun@h3c.com found When the last heap in the user process into
> the non-main-area has memory in use, the previous heap will not be released, even if the
> previous heap is already free. This mechanism resulting in the memory cache reaching 15G.

Does that cause any actual performance degradation or any other issues 
though?  heap_shrink() calls madvise (MADV_DONTNEED) on the free parts 
of the heap to tell the kernel that the blocks are not needed, so a 
fully freed heap ought to not have any performance impact.  The RSS 
footprint will depend on when the kernel reclaims those pages, which may 
not be immediate since madvise is just a hint.

Alternatively, if you disable memory overcommit by setting 
/proc/sys/vm/overcommit_memory to 2, heap_shrink() will drop all 
permissions on the heap with mprotect(PROT_NONE) instead of doing 
madvise.  This has a more immediate effect on RSS usage unlike madvise.

Siddhesh

答复: [PATCH] release all idle heaps in the non-main-arena

[Liudongyun]

> Does that cause any actual performance degradation or any other issues though?  heap_shrink() calls madvise (MADV_DONTNEED) on the free parts of the heap to tell the kernel that the blocks are not needed, so a fully freed heap ought to not have any performance impact.  The RSS footprint will depend on when the kernel 
> reclaims those pages, which may not be immediate since madvise is just a hint.
> Alternatively, if you disable memory overcommit by setting /proc/sys/vm/overcommit_memory to 2, heap_shrink() will drop all permissions on the heap with mprotect(PROT_NONE) instead of doing madvise.  This has a more immediate effect on RSS usage unlike madvise.

We released the heap, these virtual memory will be reused in new_heap function. No potential problems have been found yet. The practice in PATCH will definitely lead to an increase in system calls. Since glibc is used in many scenarios, the patch we submitted did not modify the size of the heap to be cautious.
Compared with the current mechanism in GLIBC,the probability of a large amount of physical memory resident is very high, just holding any piece of memory in TOP TUNK will cause all the memory before TOP TUNK to reside. I think it is worth it.

These days, we coordinate with colleagues to test the performance of the patch.Our amendment is as follows.
1. Set the size of heap to 512KB (the submitted patch is 64M by default);
2. Release the unused heap (consistent with the submitted patch)
In the same test environment(Intel(R) Xeon(R) CPU @ 2.00GHz,  12 processors， 32G RAM), we try to simulate using the maximum specification of business data. 
There is little performance degradation. The test results are as follows.
Package(Bytes)    Not patched      Patched
128	        	24.88Mpps		24.10Mpps
256      		24.60Mpps		24.18Mpps
512	       	 	15.51Mpps		15.51Mpps
1024			7.14Mpps		7.48Mpps
1280			5.52Mpps		5.52Mpps
1400			4.89Mpps		4.89Mpps
1518			4.51Mpps		4.51Mpps

Thank you very much for your advice.
1, I have thought about this method before, but I gave up due to it's just a hint.
2, As the problem has been solved, I can't coordinate to the classmate test again for your suggestion. I'll test it myself.

-----邮件原件-----
发件人: Siddhesh Poyarekar [mailto:siddhesh@gotplt.org] 
发送时间: 2021年6月11日 14:42
收件人: liudongyun (RD) <liu.dongyun@h3c.com>; libc-alpha@sourceware.org
抄送: libc-locales@sourceware.org; libc-maintainers@gnu.org; denghongjie (RD) <deng.hongjie@h3c.com>; daixianjun (RD) <dai.xianjun@h3c.com>
主题: Re: [PATCH] release all idle heaps in the non-main-arena

On 6/11/21 9:38 AM, liudongyun wrote:
> liu.dongyun@h3c.com report this question in follow:
> The system has a total of 32G memory and 12 core cpu.
> After frequent malloc and free memory by multiple threads, we found 
> that many physical memory that should have been released have not been 
> released.We observe that the maximum free memory can reach 15G.
> 
> deng.hongjie@h3c.com recommend reducing the heap size of the 
> non-main-arena, but it doesn't work. liu.dongyun@h3c.com found When 
> the last heap in the user process into the non-main-area has memory in 
> use, the previous heap will not be released, even if the previous heap is already free. This mechanism resulting in the memory cache reaching 15G.

Does that cause any actual performance degradation or any other issues though?  heap_shrink() calls madvise (MADV_DONTNEED) on the free parts of the heap to tell the kernel that the blocks are not needed, so a fully freed heap ought to not have any performance impact.  The RSS footprint will depend on when the kernel reclaims those pages, which may not be immediate since madvise is just a hint.

Alternatively, if you disable memory overcommit by setting /proc/sys/vm/overcommit_memory to 2, heap_shrink() will drop all permissions on the heap with mprotect(PROT_NONE) instead of doing madvise.  This has a more immediate effect on RSS usage unlike madvise.

Siddhesh