From: "Alois Schlögl" <alois.schloegl@gmail.com>
To: Achim Gratz <Stromeko@nexgo.de>, cygwin-apps@cygwin.com
Subject: Re: [ITP] biosig [was: Re: newcomer issues when packaging biosig, stimfit, etc.]
Date: Mon, 17 Jan 2022 22:44:49 +0100 [thread overview]
Message-ID: <91c9b104-69b2-01b5-9099-3af74a8522ff@gmail.com> (raw)
In-Reply-To: <87ee584tlv.fsf@Rainer.invalid>
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Am 1/15/22 um 21:44 schrieb Achim Gratz:
> Marco Atzeri writes:
>> add DIFF_EXCLUDES="Makefile" to avoid the artifact
> DISTCLEANFILES would be more appropriate it seems.
>
>
> Regards,
> Achim.
I tried this (see attachment), but I'm not sure this is what you meant.
Regards,
Alois
[-- Attachment #2: biosig.cygport --]
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# package name
NAME="biosig"
VERSION=2.3.3
RELEASE=1
# .hint generation
CATEGORY="Libs,Science"
SUMMARY="Tools for biomedical signal processing."
DESCRIPTION="BioSig is an open source software library for
biomedical signal processing, featuring for example the
analysis of biosignals such as the electroencephalogram (EEG),
electrocorticogram (ECoG), electrocardiogram (ECG),
electrooculogram (EOG), electromyogram (EMG), respiration,
and so on. Major application areas are: Neuroinformatics,
brain-computer interfaces, neurophysiology, psychology, c
ardiovascular systems and sleep research. The aim of the
BioSig project is to foster research in biomedical signal
processing by providing open source software tools for many
different applications. Generally, many concerns have to be a
ddressed in this scientific field. BioSig handles this by providing
solutions for data acquisition, artifact processing, quality control,
feature extraction, classification, modeling, data visualization, etc. "
# source and patch files
SRC_URI="https://sourceforge.net/projects/biosig/files/BioSig%20for%20C_C%2B%2B/src/biosig-2.3.3.src.tar.gz"
# PATCH_URI="biosig-2.3.3-fix-build.patch"
# use the standard src_compile, src_install and src_test
PKG_NAMES="libbiosig libbiosig-devel biosig-tools python3-biosig"
# PKG_NAMES="libbiosig libbiosig-devel biosig-tools"
biosig_tools_CONTENTS="
usr/bin/save2gdf.exe
usr/bin/physicalunits.exe
usr/bin/biosig2gdf.exe
usr/share/man/man1/save2gdf.1.gz
usr/share/man/man1/biosig2gdf.1.gz
usr/share/man/man1/biosig_fhir.1.gz
usr/share/man/man1/physicalunits.1.gz
usr/share/doc/biosig/COPYING
usr/share/doc/biosig/README
"
# not included yet
# usr/share/man/biosig_fhir.1 usr/share/man/sigviewer.1
libbiosig_CONTENTS="
usr/bin/libbiosig.dll
usr/bin/libphysicalunits.dll
"
libbiosig_devel_CONTENTS="
usr/include/biosig-dev.h
usr/include/biosig.h
usr/include/biosig2.h
usr/include/gdftime.h
usr/include/physicalunits.h
usr/include/biosig-network.h
usr/include/mdc_ecg_codes.h
usr/lib/libbiosig.a
usr/lib/libbiosig.dll.a
usr/lib/libphysicalunits.a
usr/lib/libphysicalunits.dll.a
usr/lib/pkgconfig/libbiosig.pc
"
#python3-biosig_CONTENTS="
# dist/Biosig-2.3.3-cp39-cp39-cygwin_3_3_3_x86_64.whl
#"
DIFF_EXCLUDES="depend"
# CYGPORT_USE_UNSTABLE_API=1
# use not standard src_compile, src_install and src_test
src_prep() {
DISTCLEANFILES
}
src_compile() {
cd ${S}
lndirs
cd ${B}
cygautoreconf
cygconf # --prefix=/usr
# libbiosig
cygmake lib
# biosig-tools w/o biosig_fhir
cygmake -C biosig4c++ save2gdf physicalunits biosig2gdf
# python3-biosig
cygmake -C biosig4c++/python wheel
# cd ${B}/biosig4c++/python/
# python3_distutils_compile bdist_wheel
# python3_wheel_compile
}
src_install() {
cd ${S}
doinclude ${S}/biosig4c++/*.h
dobin ${B}/biosig4c++/save2gdf.exe
# dobin ${B}/biosig4c++/biosig_fhir.exe
dobin ${B}/biosig4c++/biosig2gdf.exe
dobin ${B}/biosig4c++/physicalunits.exe
dobin ${B}/biosig4c++/libbiosig.dll
dobin ${B}/biosig4c++/libphysicalunits.dll
dolib ${B}/biosig4c++/libbiosig.dll.a
dolib ${B}/biosig4c++/libbiosig.a
dolib ${B}/biosig4c++/libphysicalunits.dll.a
dolib ${B}/biosig4c++/libphysicalunits.a
dopkgconfig ${B}/biosig4c++/libbiosig.pc
# doman ${S}/biosig4c++/doc/bin2rec.1
doman ${S}/biosig4c++/doc/biosig2gdf.1
doman ${S}/biosig4c++/doc/biosig_fhir.1
doman ${S}/biosig4c++/doc/physicalunits.1
doman ${S}/biosig4c++/doc/save2gdf.1
# dowheel ${B}/biosig4c++/python/dist/Biosig-2.3.3-cp39-cp39-cygwin_3_3_3_x86_64.whl
}
src_test() {
cd ${B}
biosig4c++/physicalunits.exe
biosig4c++/save2gdf.exe --help
# biosig4c++/biosig_fhir.exe --help
python -c "import biosig"
check_python3_module biosigABC
}
next prev parent reply other threads:[~2022-01-17 21:44 UTC|newest]
Thread overview: 22+ messages / expand[flat|nested] mbox.gz Atom feed top
[not found] <99eff890-3d7f-7fa9-1f42-d8d611b92ded@gmail.com>
2022-01-08 17:41 ` newcomer issues when packaging biosig,stimfit, etc Marco Atzeri
2022-01-08 19:15 ` Marco Atzeri
2022-01-08 19:24 ` Marco Atzeri
[not found] ` <a3f8e657-1e1d-c582-2a07-806c6c03be02@gmail.com>
2022-01-12 5:47 ` Marco Atzeri
2022-01-12 6:16 ` Brian Inglis
2022-01-12 22:59 ` [ITP] biosig [was: Re: newcomer issues when packaging biosig, stimfit, etc.] Alois Schlögl
2022-01-14 10:09 ` Marco Atzeri
2022-01-14 21:48 ` Alois Schlögl
2022-01-15 18:01 ` Marco Atzeri
2022-01-15 20:44 ` Achim Gratz
2022-01-17 21:44 ` Alois Schlögl [this message]
2022-01-18 5:32 ` Brian Inglis
2022-01-18 21:50 ` Alois Schlögl
2022-01-18 22:56 ` Brian Inglis
2022-01-19 3:51 ` Brian Inglis
2022-01-20 20:48 ` Alois Schlögl
2022-01-21 12:53 ` Jon Turney
2022-01-16 22:13 ` Alois Schlögl
2022-01-22 17:52 ` Marco Atzeri
2022-01-25 23:50 ` Alois Schlögl
2022-01-26 4:52 ` Marco Atzeri
2022-01-26 22:47 ` Marco Atzeri
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