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From: Marco Atzeri <marco.atzeri@gmail.com>
To: cygwin@cygwin.com
Subject: Re: Updated Cygwin64 with 2.4.1.1
Date: Mon, 25 Jan 2016 20:48:00 -0000	[thread overview]
Message-ID: <56A5F7AA.9010401@gmail.com> (raw)
In-Reply-To: <BAY175-W5181E01DB1BED570790586ADC60@phx.gbl>

On 25/01/2016 00:39, Robert May wrote:

Hi Robert,
The mail subject is not very useful


> Instalation error
> -/unknown package
> x3270.sh exit code 1

this is an issue completely unrelated to the rest of your mail

> htslib configure - make - make install ok
>
> samtools configure ok
>
> Robert@DESKTOP-14EL82S /usr/local/bin/samtools-1.3

Personal preference: in general  "/usr/local/bin" is not the place
that I will use as build area.

> $ ./configure

can you please clarify what is your problem ?

I tried to build samtools-1.3 and it has at least two issue
for a porting to cygwin:

- on Makefile there is a -rdynamic that does not work on cygwin
- the package require expl and logl that are not yet available in cygwin



Regards
Marco




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  reply	other threads:[~2016-01-25 10:23 UTC|newest]

Thread overview: 3+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
     [not found] <BAY175-W1506B08F4E02E2A7091D3FADC60@phx.gbl>
2016-01-25  3:06 ` Robert May
2016-01-25 20:48   ` Marco Atzeri [this message]
2016-01-25 21:05 Robert May

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