* duplicate between packages
@ 2021-04-27 3:45 Marco Atzeri
2021-05-01 21:48 ` Ken Brown
` (3 more replies)
0 siblings, 4 replies; 7+ messages in thread
From: Marco Atzeri @ 2021-04-27 3:45 UTC (permalink / raw)
To: cygwin-apps
Hi Maintainers,
as I just found 2 of my packages colliding with same program name
$ cygcheck -f /usr/bin/ncgen
hdf4-4.2.15-3
netcdf-4.8.0-2
as one is much older than the other, the installation sequence
can give some inconsistencies in the system.
So I checked on my /etc/setup how many duplicates there are
and it seems also other package has the same problem
Some are not an issue, but on the binaries I can not judge
$ cygcheck -f /usr/i686-w64-mingw32/sys-root/mingw/include/pthread_signal.h
mingw64-i686-headers-8.0.0-1
mingw64-i686-winpthreads-8.0.0-1
$ cygcheck -f /usr/bin/t1asm.exe
t1utils-1.39-1
texlive-20210325-1
$ cd /etc/setup
$ zcat *.lst.gz | sed '/\/$/d' | sort |uniq -c | awk '$1 > 1'
3 etc/postinstall/python3-wx.sh
2 usr/bin/gpgsplit.exe
2 usr/bin/ncdump.exe
2 usr/bin/ncgen.exe
2 usr/bin/prove
2 usr/bin/pygmentex
2 usr/bin/shasum
2 usr/bin/t1ascii.exe
2 usr/bin/t1asm.exe
2 usr/bin/t1binary.exe
2 usr/bin/t1disasm.exe
2 usr/bin/t1mac.exe
2 usr/bin/t1unmac.exe
2 usr/i686-w64-mingw32/sys-root/mingw/include/pthread_signal.h
2 usr/lib/cygh5bzip2.dll
3 usr/share/aclocal/README
2 usr/share/doc/fltk/CHANGES
2 usr/share/doc/fltk/COPYING
2 usr/share/doc/fltk/CREDITS
2 usr/share/doc/fltk/examples/adjuster.cxx
...
2 usr/share/doc/fltk/examples/valuators.h
2 usr/share/doc/fltk/README
2 usr/share/doc/libsodium/AUTHORS
2 usr/share/doc/libsodium/ChangeLog
2 usr/share/doc/libsodium/LICENSE
2 usr/share/doc/libsodium/THANKS
2 usr/share/doc/libspiro/README
2 usr/share/doc/libuninameslist/COPYING
2 usr/share/doc/libuninameslist/LICENSE
2 usr/share/doc/webrtc-audio-processing/AUTHORS
2 usr/share/doc/webrtc-audio-processing/COPYING
2 usr/share/doc/webrtc-audio-processing/NEWS
2 usr/share/doc/webrtc-audio-processing/README
2 usr/share/info/guile.info.gz
...
2 usr/share/info/guile.info-9.gz
2 usr/share/info/r5rs.info.gz
2 usr/share/man/man1/ncdump.1.gz
2 usr/share/man/man1/ncgen.1.gz
2 usr/share/man/man1/passwd.1.gz
2 usr/share/man/man1/pdfdetach.1.gz
2 usr/share/man/man1/pdffonts.1.gz
2 usr/share/man/man1/pdfimages.1.gz
2 usr/share/man/man1/pdfinfo.1.gz
2 usr/share/man/man1/pdftohtml.1.gz
2 usr/share/man/man1/pdftoppm.1.gz
2 usr/share/man/man1/pdftops.1.gz
2 usr/share/man/man1/pdftotext.1.gz
2 usr/share/man/man1/ts.1.gz
2 usr/share/texmf-dist/doc/generic/tex-ini-files/README.md
2 usr/share/texmf-dist/scripts/pygmentex/pygmentex.py
2 usr/share/texmf-dist/tex/latex/pygmentex/pygmentex.sty
2 usr/share/tlpkg/tlpobj/pygmentex.i386-cygwin.tlpobj
2 usr/share/tlpkg/tlpobj/pygmentex.tlpobj
2 usr/share/tlpkg/tlpobj/pygmentex.x86_64-cygwin.tlpobj
2 usr/share/tlpkg/tlpobj/tex-ini-files.doc.tlpobj
2 usr/x86_64-w64-mingw32/sys-root/mingw/include/pthread_signal.h
Regards
Marco
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: duplicate between packages
2021-04-27 3:45 duplicate between packages Marco Atzeri
@ 2021-05-01 21:48 ` Ken Brown
2021-05-02 1:47 ` duplicate between packages (libuninameslist) Lemures Lemniscati
` (2 subsequent siblings)
3 siblings, 0 replies; 7+ messages in thread
From: Ken Brown @ 2021-05-01 21:48 UTC (permalink / raw)
To: cygwin-apps
On 4/26/2021 11:45 PM, Marco Atzeri via Cygwin-apps wrote:
> Hi Maintainers,
>
> as I just found 2 of my packages colliding with same program name
>
> $ cygcheck -f /usr/bin/ncgen
> hdf4-4.2.15-3
> netcdf-4.8.0-2
>
> as one is much older than the other, the installation sequence
> can give some inconsistencies in the system.
>
> So I checked on my /etc/setup how many duplicates there are
> and it seems also other package has the same problem
>
> Some are not an issue, but on the binaries I can not judge
>
> $ cygcheck -f /usr/i686-w64-mingw32/sys-root/mingw/include/pthread_signal.h
> mingw64-i686-headers-8.0.0-1
> mingw64-i686-winpthreads-8.0.0-1
>
> $ cygcheck -f /usr/bin/t1asm.exe
> t1utils-1.39-1
> texlive-20210325-1
>
>
> $ cd /etc/setup
> $ zcat *.lst.gz | sed '/\/$/d' | sort |uniq -c | awk '$1 > 1'
>
> 3 etc/postinstall/python3-wx.sh
> 2 usr/bin/gpgsplit.exe
> 2 usr/bin/ncdump.exe
> 2 usr/bin/ncgen.exe
> 2 usr/bin/prove
> 2 usr/bin/pygmentex
> 2 usr/bin/shasum
> 2 usr/bin/t1ascii.exe
> 2 usr/bin/t1asm.exe
> 2 usr/bin/t1binary.exe
> 2 usr/bin/t1disasm.exe
> 2 usr/bin/t1mac.exe
> 2 usr/bin/t1unmac.exe
> 2 usr/i686-w64-mingw32/sys-root/mingw/include/pthread_signal.h
> 2 usr/lib/cygh5bzip2.dll
> 3 usr/share/aclocal/README
> 2 usr/share/doc/fltk/CHANGES
> 2 usr/share/doc/fltk/COPYING
> 2 usr/share/doc/fltk/CREDITS
> 2 usr/share/doc/fltk/examples/adjuster.cxx
> ...
> 2 usr/share/doc/fltk/examples/valuators.h
> 2 usr/share/doc/fltk/README
> 2 usr/share/doc/libsodium/AUTHORS
> 2 usr/share/doc/libsodium/ChangeLog
> 2 usr/share/doc/libsodium/LICENSE
> 2 usr/share/doc/libsodium/THANKS
> 2 usr/share/doc/libspiro/README
> 2 usr/share/doc/libuninameslist/COPYING
> 2 usr/share/doc/libuninameslist/LICENSE
> 2 usr/share/doc/webrtc-audio-processing/AUTHORS
> 2 usr/share/doc/webrtc-audio-processing/COPYING
> 2 usr/share/doc/webrtc-audio-processing/NEWS
> 2 usr/share/doc/webrtc-audio-processing/README
> 2 usr/share/info/guile.info.gz
> 2 usr/share/info/guile.info-9.gz
> 2 usr/share/info/r5rs.info.gz
> 2 usr/share/man/man1/ncdump.1.gz
> 2 usr/share/man/man1/ncgen.1.gz
> 2 usr/share/man/man1/passwd.1.gz
> 2 usr/share/man/man1/pdfdetach.1.gz
> 2 usr/share/man/man1/pdffonts.1.gz
> 2 usr/share/man/man1/pdfimages.1.gz
> 2 usr/share/man/man1/pdfinfo.1.gz
> 2 usr/share/man/man1/pdftohtml.1.gz
> 2 usr/share/man/man1/pdftoppm.1.gz
> 2 usr/share/man/man1/pdftops.1.gz
> 2 usr/share/man/man1/pdftotext.1.gz
> 2 usr/share/man/man1/ts.1.gz
> 2 usr/share/texmf-dist/doc/generic/tex-ini-files/README.md
> 2 usr/share/texmf-dist/scripts/pygmentex/pygmentex.py
> 2 usr/share/texmf-dist/tex/latex/pygmentex/pygmentex.sty
> 2 usr/share/tlpkg/tlpobj/pygmentex.i386-cygwin.tlpobj
> 2 usr/share/tlpkg/tlpobj/pygmentex.tlpobj
> 2 usr/share/tlpkg/tlpobj/pygmentex.x86_64-cygwin.tlpobj
> 2 usr/share/tlpkg/tlpobj/tex-ini-files.doc.tlpobj
> 2 usr/x86_64-w64-mingw32/sys-root/mingw/include/pthread_signal.h
Thanks, Marco. Several of these involve my packages. I'll take a look at those.
Ken
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: duplicate between packages (libuninameslist)
2021-04-27 3:45 duplicate between packages Marco Atzeri
2021-05-01 21:48 ` Ken Brown
@ 2021-05-02 1:47 ` Lemures Lemniscati
2021-05-02 4:54 ` Marco Atzeri
2021-05-02 5:49 ` Achim Gratz
2021-05-04 17:13 ` duplicate between packages Jon Turney
2021-05-20 16:26 ` Ken Brown
3 siblings, 2 replies; 7+ messages in thread
From: Lemures Lemniscati @ 2021-05-02 1:47 UTC (permalink / raw)
To: cygwin-apps
On Tue, 27 Apr 2021 05:45:40 +0200, Marco Atzeri via Cygwin-apps
> So I checked on my /etc/setup how many duplicates there are
> and it seems also other package has the same problem
>
> Some are not an issue, but on the binaries I can not judge
> $ cd /etc/setup
> $ zcat *.lst.gz | sed '/\/$/d' | sort |uniq -c | awk '$1 > 1'
> 2 usr/share/doc/libuninameslist/COPYING
> 2 usr/share/doc/libuninameslist/LICENSE
About libuninameslist (which I maintain), these files are contained in:
libuninameslist0-20091231-1
libuninameslist-devel-20200413p3-1
When I updated libuninameslist packages, I've moved the files from
libuninameslist[01] into libuninameslist-devel.
So, duplication will last until libuninamelist0 is removed.
To reduce the duplication, I should make libuninameslist0-20091231-2
in some way (e.g. removing duplicated files, or renaming them).
I wonder what is a good way...
Regards,
Lem
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: duplicate between packages (libuninameslist)
2021-05-02 1:47 ` duplicate between packages (libuninameslist) Lemures Lemniscati
@ 2021-05-02 4:54 ` Marco Atzeri
2021-05-02 5:49 ` Achim Gratz
1 sibling, 0 replies; 7+ messages in thread
From: Marco Atzeri @ 2021-05-02 4:54 UTC (permalink / raw)
To: cygwin-apps
On 02.05.2021 03:47, Lemures Lemniscati via Cygwin-apps wrote:
> On Tue, 27 Apr 2021 05:45:40 +0200, Marco Atzeri via Cygwin-apps
>
>> 2 usr/share/doc/libuninameslist/COPYING
>> 2 usr/share/doc/libuninameslist/LICENSE
>
> About libuninameslist (which I maintain), these files are contained in:
>
> libuninameslist0-20091231-1
> libuninameslist-devel-20200413p3-1
>
> When I updated libuninameslist packages, I've moved the files from
> libuninameslist[01] into libuninameslist-devel.
>
> So, duplication will last until libuninamelist0 is removed.
no big deal as they are the same file. it can wait the next release.
> To reduce the duplication, I should make libuninameslist0-20091231-2
> in some way (e.g. removing duplicated files, or renaming them).
it should contain only the dll; I found the style
libgdal28_CONTENTS="usr/bin/cyggdal-28.dll"
is useful to notice upstream API bump, that sometime they
forget to announce
> Regards,
>
> Lem
>
Regards
Marco
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: duplicate between packages (libuninameslist)
2021-05-02 1:47 ` duplicate between packages (libuninameslist) Lemures Lemniscati
2021-05-02 4:54 ` Marco Atzeri
@ 2021-05-02 5:49 ` Achim Gratz
1 sibling, 0 replies; 7+ messages in thread
From: Achim Gratz @ 2021-05-02 5:49 UTC (permalink / raw)
To: cygwin-apps
Lemures Lemniscati via Cygwin-apps writes:
> When I updated libuninameslist packages, I've moved the files from
> libuninameslist[01] into libuninameslist-devel.
>
> So, duplication will last until libuninamelist0 is removed.
That is one of the things setup can't handle very well, but you can use
cygcheck to see if the duplicate got removed during installation. In
this particular case I'd think there is not much of a problem.
> To reduce the duplication, I should make libuninameslist0-20091231-2
> in some way (e.g. removing duplicated files, or renaming them).
The problem is not that there is duplication among different versions of
the poackage (which is unavoidable when you move files between
packages), but that the order of removal and installation is not
deterministic.
> I wonder what is a good way...
You might think that re-releasing would fix things, but then you'd need
to ensure that eveybody had updated to before the re-release already.
That generally doesn't work. We could eventually use package
transactions (libsolv supports that) to really ensure things work
correctly, but we're missing lots of bits to make that happen.
So I have this at the moment for instance:
Missing file: /usr/lib/debug/usr/bin/ncdump.exe.dbg from package netcdf-debuginfo
Missing file: /usr/lib/debug/usr/bin/ncgen.exe.dbg from package netcdf-debuginfo
netcdf-debuginfo 4.8.0-2 Incomplete
which is the problem that originally prompted Marco to look for
duplicates I guess. But I'm updating my instzallation quite often, so
it's unlikely I miss an intermediate version.
Regards,
Achim.
--
+<[Q+ Matrix-12 WAVE#46+305 Neuron microQkb Andromeda XTk Blofeld]>+
SD adaptation for Waldorf rackAttack V1.04R1:
http://Synth.Stromeko.net/Downloads.html#WaldorfSDada
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: duplicate between packages
2021-04-27 3:45 duplicate between packages Marco Atzeri
2021-05-01 21:48 ` Ken Brown
2021-05-02 1:47 ` duplicate between packages (libuninameslist) Lemures Lemniscati
@ 2021-05-04 17:13 ` Jon Turney
2021-05-20 16:26 ` Ken Brown
3 siblings, 0 replies; 7+ messages in thread
From: Jon Turney @ 2021-05-04 17:13 UTC (permalink / raw)
To: cygwin-apps
On 27/04/2021 04:45, Marco Atzeri via Cygwin-apps wrote:
> Hi Maintainers,
>
> as I just found 2 of my packages colliding with same program name
>
> $ cygcheck -f /usr/bin/ncgen
> hdf4-4.2.15-3
> netcdf-4.8.0-2
>
> as one is much older than the other, the installation sequence
> can give some inconsistencies in the system.
>
> So I checked on my /etc/setup how many duplicates there are
> and it seems also other package has the same problem
>
> Some are not an issue, but on the binaries I can not judge
Yeah, nothing prevents this from happening at the moment.
I did think that calm could do some checking of this (since it needs to
look at the files in a package to generate the data used by the 'search
package contents' web page).
But since we can't know about the contents of packages which might come
from 3rd-party package repos, I think this also needs to be a feature of
setup.
^ permalink raw reply [flat|nested] 7+ messages in thread
* Re: duplicate between packages
2021-04-27 3:45 duplicate between packages Marco Atzeri
` (2 preceding siblings ...)
2021-05-04 17:13 ` duplicate between packages Jon Turney
@ 2021-05-20 16:26 ` Ken Brown
3 siblings, 0 replies; 7+ messages in thread
From: Ken Brown @ 2021-05-20 16:26 UTC (permalink / raw)
To: cygwin-apps
On 4/26/2021 11:45 PM, Marco Atzeri via Cygwin-apps wrote:
> Hi Maintainers,
>
> as I just found 2 of my packages colliding with same program name
>
> $ cygcheck -f /usr/bin/ncgen
> hdf4-4.2.15-3
> netcdf-4.8.0-2
>
> as one is much older than the other, the installation sequence
> can give some inconsistencies in the system.
>
> So I checked on my /etc/setup how many duplicates there are
> and it seems also other package has the same problem
> 2 usr/bin/pygmentex
This and the other pygmentex duplicates you found are due to a packaging error,
in which I included pygmentex in both texlive-collection-latexextra and
texlive-collection-mathscience. I've just fixed this with an update of
texlive-collection-mathscience.
> 2 usr/bin/t1ascii.exe
> 2 usr/bin/t1asm.exe
> 2 usr/bin/t1binary.exe
> 2 usr/bin/t1disasm.exe
> 2 usr/bin/t1mac.exe
> 2 usr/bin/t1unmac.exe
These are in t1utils as well as texlive. The t1utils package is currently
orphaned, and the upstream package is included in TeX Live
(https://ctan.org/pkg/t1utils?lang=en). So I'm inclined to ignore this for now.
If anyone ever wants to take over maintainership of t1utils, we can discuss
what to do.
> 2 usr/share/man/man1/pdfdetach.1.gz
> 2 usr/share/man/man1/pdffonts.1.gz
> 2 usr/share/man/man1/pdfimages.1.gz
> 2 usr/share/man/man1/pdfinfo.1.gz
> 2 usr/share/man/man1/pdftohtml.1.gz
> 2 usr/share/man/man1/pdftoppm.1.gz
> 2 usr/share/man/man1/pdftops.1.gz
> 2 usr/share/man/man1/pdftotext.1.gz
This is another packaging bug. The files are included in both xpdf and poppler,
but they should only be in poppler. I'll fix it when xpdf is next updated.
> 2 usr/share/texmf-dist/doc/generic/tex-ini-files/README.md
And another one. This is in both texlive-collection-basic and
texlive-collection-basic-doc. I'll fix it in the next update.
Ken
^ permalink raw reply [flat|nested] 7+ messages in thread
end of thread, other threads:[~2021-05-20 16:26 UTC | newest]
Thread overview: 7+ messages (download: mbox.gz / follow: Atom feed)
-- links below jump to the message on this page --
2021-04-27 3:45 duplicate between packages Marco Atzeri
2021-05-01 21:48 ` Ken Brown
2021-05-02 1:47 ` duplicate between packages (libuninameslist) Lemures Lemniscati
2021-05-02 4:54 ` Marco Atzeri
2021-05-02 5:49 ` Achim Gratz
2021-05-04 17:13 ` duplicate between packages Jon Turney
2021-05-20 16:26 ` Ken Brown
This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).